evolutionary biology, genomics, bioinformatics





Publications

Look at my Scholar profile


Workshop and summer school organization

Co-director of the Workshop on Population and Speciation Genomics, Cesky Krumlov, Czech Republic. 2016-2018-2020

Teaching at the PhD course in Population Genomics (BIO9001), Nord University, Bodø, Norway, 09-15/03/20. Course organized by Joost Raeymaekers and sponsored by NORBIS, Norway

Teaching at the PHYLOPOP course - Bridging Phylogeny and Population genetics: Inferring divergence and selection at both interspecies and intraspecies level. FEM, San Michele all’ Adige, Italy, 27/08-01/09/19

Organization and teaching a RADseq data analysis course for PhDs and postdocs at the University of Milan, Italy. Edolo, 6-12/06/2015.

Teacher Assistant at the Workshop on Molecular Evolution, Cesky Krumlov, Czech Republic. 2015

Co-organizer and teaching the RADseq wet lab and data analysis, University of Oslo, Norway. 2013. Organised by Magnus Popp and sponsored by ForBIO, Nordic countries


Good stuff

Long ago, I settled and managed the RADseq platform at CEES, UiO, Norway.


Tutorials and scripts

This tutorial explains how to infer the past demography of a population using a selection of hyper-variable RAD loci and the Extended Bayesian Skyline Plot (EBSP)

This python script can be used to filter the output file generated by the function export_sql.pl in the good old Stacks 1 version (Catchen et al. 2013)


Seminar and conference activity

Selected speaker at international conferences: ESEB2013 (Lisbon, Portugal), ESEB2015 (Lausanne, Switzerland), ESEB2017 (Groningen, the Netherlands), GfOE 2015 (Goettingen, Germany) SIBE2008 (Alghero, Italy), SIBE2015 (Bologna, Italy), SIBE2017 (Roma, Italy), SIBE2019 (Padua, Italy), FISV2014 (Pisa, Italy)

Invited speaker at international scientific meetings and advanced schools: Workshop on Genomics (Cesky Krumlov, Czech Republic, 2020), 40th New Phytologist Symposium (Vienna, Austria, 2017), BIOM Spring Camp (Koněšín, Czech Republic, 2016), SIBE winter workshop on selection inference (Ferrara, Italy, 2016), sEpiDiv (sDIV, Leipzig, Germany, 2015), ForBIO (Olso, Norway, 2013)

Invited seminars at research institutions: Dept of Biosciences, Aarhus University (Aarhus Denmark, 2014), Institute of Parasitology, University of South Bohemia (Cesky Budejovice, Czech Republic, 2015), KLIVV, VetMedUni (Vienna, Austria, 2016), Center for Marine Science, University of Queensland (Brisbane, Australia, 2018), Australian Rivers Institute, Griffith University (Brisbane, Australia, 2018)